Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm8385-201ENSMUST00000058999 643 ntBASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shisa4Q8CA71 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Gm15004-201ENSMUST00000119192 630 ntBASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.13□□□□□ -0.15
Shisa4Q8CA71 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shisa4Q8CA71 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm22133-201ENSMUST00000102082 109 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm15515-201ENSMUST00000117827 822 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm8566-201ENSMUST00000120174 465 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa4Q8CA71 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm29615-201ENSMUST00000185371 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm28224-201ENSMUST00000186078 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm29001-201ENSMUST00000186177 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm28292-201ENSMUST00000186593 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm28101-201ENSMUST00000187608 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm29076-201ENSMUST00000187689 697 ntBASIC14.12□□□□□ -0.15
Shisa4Q8CA71 Gm28302-201ENSMUST00000187931 697 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms