Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm12742-201ENSMUST00000117326 410 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm1335-201ENSMUST00000121653 386 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm2231-201ENSMUST00000125661 612 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rft1Q8C3B8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rft1Q8C3B8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rft1Q8C3B8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms