Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ptcd1Q8C2E4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm13047-201ENSMUST00000117116 815 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Rmrp-201ENSMUST00000157463 271 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm23085-201ENSMUST00000157849 293 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm807-202ENSMUST00000224929 408 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm26448-201ENSMUST00000082446 203 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ptcd1Q8C2E4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ptcd1Q8C2E4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ptcd1Q8C2E4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ptcd1Q8C2E4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.08■□□□□ 0.01
Ptcd1Q8C2E4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ptcd1Q8C2E4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ptcd1Q8C2E4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm25880-201ENSMUST00000104331 132 ntBASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ptcd1Q8C2E4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms