Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tsen54Q8C2A2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm27892-201ENSMUST00000185017 106 ntBASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm8463-201ENSMUST00000208573 613 ntBASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms