Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm7207-201ENSMUST00000211575 1067 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm9796-201ENSMUST00000062249 2250 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm44152-201ENSMUST00000205007 1691 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm7851-201ENSMUST00000117574 323 ntBASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm6506-201ENSMUST00000119775 1136 ntBASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm8566-201ENSMUST00000120174 465 ntBASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm15610-201ENSMUST00000120584 195 ntBASIC17.18■□□□□ 0.34
Usp47Q8BY87 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Gm9333-201ENSMUST00000205452 1323 ntBASIC17.18■□□□□ 0.34
Usp47Q8BY87 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp47Q8BY87 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm8199-201ENSMUST00000121323 823 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Usp47Q8BY87 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm38228-201ENSMUST00000193169 1293 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm42682-201ENSMUST00000198349 1265 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm4482-201ENSMUST00000200876 742 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp47Q8BY87 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC17.17■□□□□ 0.34
Usp47Q8BY87 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gm13045-201ENSMUST00000119019 712 ntBASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gm11941-201ENSMUST00000119904 610 ntBASIC17.16■□□□□ 0.34
Usp47Q8BY87 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gm4310-201ENSMUST00000177847 889 ntBASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gm42599-201ENSMUST00000201308 469 ntBASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.16■□□□□ 0.34
Usp47Q8BY87 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms