Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm15198-201ENSMUST00000117283 177 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm8738-201ENSMUST00000172606 329 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm3890-201ENSMUST00000182416 207 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm18584-201ENSMUST00000203098 964 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trerf1Q8BXJ2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm11793-201ENSMUST00000120433 981 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trerf1Q8BXJ2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trerf1Q8BXJ2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trerf1Q8BXJ2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trerf1Q8BXJ2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms