Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Gm45199-201ENSMUST00000207640 1507 ntBASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col16a1Q8BLX7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm11979-201ENSMUST00000119629 743 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm7504-201ENSMUST00000201449 424 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm18561-201ENSMUST00000206027 804 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 AC118639.2-201ENSMUST00000226289 223 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Acot6-202ENSMUST00000222921 3622 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm13117-201ENSMUST00000120894 691 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm11244-201ENSMUST00000121243 237 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm18776-201ENSMUST00000188833 654 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col16a1Q8BLX7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm5434-202ENSMUST00000222384 1451 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm5434-201ENSMUST00000071825 1451 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm14274-201ENSMUST00000117182 615 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm5257-201ENSMUST00000121823 790 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm9089-201ENSMUST00000122027 526 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm9135-201ENSMUST00000182963 990 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm39288-201ENSMUST00000210554 446 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Gm30671-201ENSMUST00000214898 318 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col16a1Q8BLX7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.73■□□□□ 0.11
Col16a1Q8BLX7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 121.9 ms