Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smg1Q8BKX6 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm22379-201ENSMUST00000157480 131 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm45085-201ENSMUST00000209100 441 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Erich3-203ENSMUST00000189969 3460 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm7627-201ENSMUST00000183205 999 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm25394-201ENSMUST00000157338 133 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smg1Q8BKX6 Gm11957-201ENSMUST00000118304 779 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm13624-201ENSMUST00000120263 462 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm22763-201ENSMUST00000158374 107 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm5714-201ENSMUST00000197343 566 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm14942-201ENSMUST00000119642 336 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm13204-201ENSMUST00000120110 821 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm2448-201ENSMUST00000207080 559 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.05□□□□□ -0.8
Smg1Q8BKX6 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms