Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm3332-201ENSMUST00000189337 928 ntBASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Gm4157-201ENSMUST00000211647 679 ntBASIC12.87□□□□□ -0.35
Nod1Q8BHB0 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.87□□□□□ -0.35
Nod1Q8BHB0 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nod1Q8BHB0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm7722-201ENSMUST00000120646 741 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm5733-201ENSMUST00000190232 939 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Ginm1-202ENSMUST00000065124 300 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm10288-201ENSMUST00000084614 537 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nod1Q8BHB0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm12029-201ENSMUST00000120073 832 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm23085-201ENSMUST00000157849 293 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Rprl1-201ENSMUST00000158050 327 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Gm8100-201ENSMUST00000182906 988 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Nod1Q8BHB0 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.85□□□□□ -0.35
Nod1Q8BHB0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms