Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm14130-201ENSMUST00000118417 987 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm8913-201ENSMUST00000209491 641 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Gm15808-201ENSMUST00000119046 604 ntBASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Gm5419-201ENSMUST00000119301 527 ntBASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atg4dQ8BGV9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm12036-201ENSMUST00000120008 530 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm15610-201ENSMUST00000120584 195 ntBASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.37□□□□□ -0.59
Atg4dQ8BGV9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms