Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh19Q80TF3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 AY036118-201ENSMUST00000200021 923 ntBASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh19Q80TF3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh19Q80TF3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms