Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Gm3786-201ENSMUST00000202659 378 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.11□□□□□ -0.47
Pcdh8Q7TSK3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh8Q7TSK3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.09□□□□□ -0.47
Pcdh8Q7TSK3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms