Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cspg5Q71M36 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm13996-201ENSMUST00000118456 430 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm5070-201ENSMUST00000177599 862 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm27438-201ENSMUST00000183480 110 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm45770-201ENSMUST00000212105 616 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Spcs1-203ENSMUST00000226374 592 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cspg5Q71M36 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.74□□□□□ -0.37
Cspg5Q71M36 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm13736-201ENSMUST00000119272 253 ntBASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm19459-201ENSMUST00000176240 835 ntBASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Rprl1-202ENSMUST00000198476 238 ntBASIC12.73□□□□□ -0.37
Cspg5Q71M36 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.73□□□□□ -0.37
Cspg5Q71M36 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.73□□□□□ -0.37
Cspg5Q71M36 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cspg5Q71M36 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms