Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scaf4Q6PFF0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm22331-201ENSMUST00000158066 136 ntBASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm4271-201ENSMUST00000174444 973 ntBASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm29705-201ENSMUST00000212598 474 ntBASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scaf4Q6PFF0 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm12314-201ENSMUST00000118104 538 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm12036-201ENSMUST00000120008 530 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Mir6977-201ENSMUST00000184960 64 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm44958-201ENSMUST00000203734 736 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Scaf4Q6PFF0 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms