Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm15036-201ENSMUST00000118880 400 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm18059-201ENSMUST00000208073 580 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccdc85bQ6PDY0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85bQ6PDY0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm14921-201ENSMUST00000118643 908 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm16071-201ENSMUST00000119589 793 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm14716-201ENSMUST00000120138 718 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm12990-201ENSMUST00000120372 468 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm28686-201ENSMUST00000187404 609 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm17826-201ENSMUST00000189720 798 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm43752-201ENSMUST00000198475 697 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Gm18204-201ENSMUST00000209835 793 ntBASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85bQ6PDY0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms