Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm8436-201ENSMUST00000210152 1080 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm5749-201ENSMUST00000210673 1090 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gm45856-201ENSMUST00000212752 416 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slx4Q6P1D7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm8899-201ENSMUST00000214635 1332 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm11500-201ENSMUST00000118237 601 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm28937-201ENSMUST00000185413 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm29400-201ENSMUST00000187208 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm28662-201ENSMUST00000188446 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm28251-201ENSMUST00000188835 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm37318-201ENSMUST00000194325 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm38017-201ENSMUST00000194768 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm37287-201ENSMUST00000195449 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm37793-201ENSMUST00000195548 695 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm27196-201ENSMUST00000184787 2582 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Gm42941-201ENSMUST00000200347 1321 ntBASIC18.49■□□□□ 0.55
Slx4Q6P1D7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Gm24791-201ENSMUST00000104284 131 ntBASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Gm45758-201ENSMUST00000212448 1006 ntBASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Gm10263-201ENSMUST00000085163 300 ntBASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slx4Q6P1D7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm7719-201ENSMUST00000182374 975 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm8197-202ENSMUST00000193422 934 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm6450-201ENSMUST00000200896 574 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm44647-201ENSMUST00000207402 428 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm14213-201ENSMUST00000119778 768 ntBASIC18.47■□□□□ 0.55
Slx4Q6P1D7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms