Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm24830-201ENSMUST00000102024 166 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm12957-201ENSMUST00000117835 377 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm11793-201ENSMUST00000120433 981 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm43118-201ENSMUST00000199149 775 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Gm26232-201ENSMUST00000083360 166 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sp140Q6NSQ5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm24934-201ENSMUST00000103764 111 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm24845-201ENSMUST00000158034 109 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Mospd4-201ENSMUST00000180618 576 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm18054-201ENSMUST00000207539 555 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm18062-201ENSMUST00000208020 547 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Gm18055-201ENSMUST00000208254 547 ntBASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sp140Q6NSQ5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm10434-201ENSMUST00000101158 471 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm25214-201ENSMUST00000104573 129 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm11531-201ENSMUST00000117614 555 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm27572-201ENSMUST00000183702 255 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm5950-201ENSMUST00000213337 772 ntBASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sp140Q6NSQ5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sp140Q6NSQ5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sp140Q6NSQ5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sp140Q6NSQ5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sp140Q6NSQ5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms