Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm4654-201ENSMUST00000183305 982 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm8531-201ENSMUST00000188319 893 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm29288-201ENSMUST00000191582 901 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm18059-201ENSMUST00000208073 580 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.37□□□□□ -0.11
Scaf8Q6DID3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm25076-201ENSMUST00000104098 132 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm26286-201ENSMUST00000104166 134 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm12579-201ENSMUST00000118040 783 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm12948-201ENSMUST00000119406 682 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm7902-201ENSMUST00000198842 947 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm44251-201ENSMUST00000204963 442 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm35713-201ENSMUST00000210516 199 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm19009-201ENSMUST00000223072 823 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm43980-201ENSMUST00000204899 1612 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Gm8872-201ENSMUST00000197475 1341 ntBASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf8Q6DID3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Gm11836-201ENSMUST00000121022 441 ntBASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Gm23045-201ENSMUST00000175041 96 ntBASIC14.35□□□□□ -0.11
Scaf8Q6DID3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Gm45594-201ENSMUST00000211717 241 ntBASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scaf8Q6DID3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms