Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm29199-201ENSMUST00000187766 775 ntBASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.81□□□□□ -0.52
Sdc3Q64519 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.81□□□□□ -0.52
Sdc3Q64519 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sdc3Q64519 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.81□□□□□ -0.52
Sdc3Q64519 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sdc3Q64519 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm15276-201ENSMUST00000145953 498 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm25700-201ENSMUST00000177693 110 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.8□□□□□ -0.52
Sdc3Q64519 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 AA914427-201ENSMUST00000193194 1166 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm45224-201ENSMUST00000208203 414 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.8□□□□□ -0.52
Sdc3Q64519 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Sdc3Q64519 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms