Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ndufa4Q62425 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ndufa4Q62425 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ndufa4Q62425 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm11637-201ENSMUST00000120601 592 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm14719-201ENSMUST00000121891 340 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm37042-201ENSMUST00000193816 581 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 n-R5s77-201ENSMUST00000083757 119 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Gm38157-201ENSMUST00000194178 1698 ntBASIC8.84□□□□□ -0.99
Ndufa4Q62425 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ndufa4Q62425 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ndufa4Q62425 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ndufa4Q62425 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ndufa4Q62425 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ndufa4Q62425 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Gm44775-201ENSMUST00000207266 1456 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 AC108858.2-201ENSMUST00000228186 1425 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Gm15321-201ENSMUST00000121290 288 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Gm13123-201ENSMUST00000122173 492 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC8.83□□□□□ -1
Ndufa4Q62425 Gm9022-201ENSMUST00000182482 992 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Gm42612-201ENSMUST00000197986 623 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Gm43170-201ENSMUST00000199827 612 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Gm24526-201ENSMUST00000082921 158 ntBASIC8.83□□□□□ -1
Ndufa4Q62425 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.83□□□□□ -1
Ndufa4Q62425 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ndufa4Q62425 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms