Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm11578-201ENSMUST00000118530 459 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Gm39288-201ENSMUST00000210554 446 ntBASIC14.13□□□□□ -0.15
Scn9aQ62205 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn9aQ62205 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn9aQ62205 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn9aQ62205 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm11783-201ENSMUST00000119549 885 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm26982-201ENSMUST00000182250 1151 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn9aQ62205 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.12□□□□□ -0.15
Scn9aQ62205 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn9aQ62205 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm12791-201ENSMUST00000120788 655 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm6450-201ENSMUST00000200896 574 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm14005-208ENSMUST00000223654 681 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.11□□□□□ -0.15
Scn9aQ62205 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn9aQ62205 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn9aQ62205 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn9aQ62205 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms