Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cd47Q61735 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.24□□□□□ -0.61
Cd47Q61735 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cd47Q61735 Gm27682-201ENSMUST00000183930 110 ntBASIC11.24□□□□□ -0.61
Cd47Q61735 Gm29127-201ENSMUST00000188304 517 ntBASIC11.24□□□□□ -0.61
Cd47Q61735 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.24□□□□□ -0.61
Cd47Q61735 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.24□□□□□ -0.61
Cd47Q61735 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.24□□□□□ -0.61
Cd47Q61735 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Gm10268-201ENSMUST00000085340 555 ntBASIC11.24□□□□□ -0.61
Cd47Q61735 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cd47Q61735 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cd47Q61735 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Cd47Q61735 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.24□□□□□ -0.61
Cd47Q61735 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.24□□□□□ -0.61
Cd47Q61735 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cd47Q61735 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cd47Q61735 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cd47Q61735 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm24231-201ENSMUST00000104315 133 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm12439-201ENSMUST00000117162 365 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Gm14201-201ENSMUST00000117627 289 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.23□□□□□ -0.61
Cd47Q61735 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.23□□□□□ -0.61
Cd47Q61735 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm25025-201ENSMUST00000175018 111 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm38188-201ENSMUST00000192879 856 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Cd47Q61735 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Cd47Q61735 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cd47Q61735 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.23□□□□□ -0.61
Cd47Q61735 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.23□□□□□ -0.61
Cd47Q61735 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.23□□□□□ -0.61
Cd47Q61735 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd47Q61735 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cd47Q61735 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Cd47Q61735 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd47Q61735 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms