Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 Gm11591-201ENSMUST00000120063 702 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.52□□□□□ -0.25
Ift88Q61371 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 Gm29127-201ENSMUST00000188304 517 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 Gm43818-201ENSMUST00000200605 466 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Gm10076-201ENSMUST00000073238 384 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.52□□□□□ -0.25
Ift88Q61371 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.52□□□□□ -0.25
Ift88Q61371 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ift88Q61371 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ift88Q61371 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ift88Q61371 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.51□□□□□ -0.25
Ift88Q61371 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ift88Q61371 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ift88Q61371 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ift88Q61371 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 Gm24830-201ENSMUST00000102024 166 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
Ift88Q61371 Gm13342-201ENSMUST00000121055 207 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.51□□□□□ -0.25
Ift88Q61371 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Gm39404-201ENSMUST00000216350 313 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Gm26232-201ENSMUST00000083360 166 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.51□□□□□ -0.25
Ift88Q61371 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ift88Q61371 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ift88Q61371 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ift88Q61371 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ift88Q61371 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.5□□□□□ -0.25
Ift88Q61371 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ift88Q61371 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.5□□□□□ -0.25
Ift88Q61371 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ift88Q61371 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ift88Q61371 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.5□□□□□ -0.25
Ift88Q61371 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms