Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ClpbQ60649 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.77□□□□□ -0.53
ClpbQ60649 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ClpbQ60649 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.77□□□□□ -0.53
ClpbQ60649 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.77□□□□□ -0.53
ClpbQ60649 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ClpbQ60649 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpbQ60649 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
ClpbQ60649 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
ClpbQ60649 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.76□□□□□ -0.53
ClpbQ60649 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Gm25668-201ENSMUST00000157700 129 ntBASIC11.76□□□□□ -0.53
ClpbQ60649 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ClpbQ60649 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.76□□□□□ -0.53
ClpbQ60649 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.76□□□□□ -0.53
ClpbQ60649 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ClpbQ60649 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpbQ60649 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClpbQ60649 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ClpbQ60649 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.75□□□□□ -0.53
ClpbQ60649 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Gm13736-201ENSMUST00000119272 253 ntBASIC11.75□□□□□ -0.53
ClpbQ60649 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.75□□□□□ -0.53
ClpbQ60649 Gm37259-201ENSMUST00000193903 849 ntBASIC11.75□□□□□ -0.53
ClpbQ60649 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.75□□□□□ -0.53
ClpbQ60649 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.75□□□□□ -0.53
ClpbQ60649 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ClpbQ60649 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.75□□□□□ -0.53
ClpbQ60649 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpbQ60649 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
ClpbQ60649 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.74□□□□□ -0.53
ClpbQ60649 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpbQ60649 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClpbQ60649 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms