Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shroom1Q5SX79 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm12176-201ENSMUST00000121420 875 ntBASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm27627-201ENSMUST00000183644 150 ntBASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shroom1Q5SX79 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.02□□□□□ -0.32
Shroom1Q5SX79 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Gm24231-201ENSMUST00000104315 133 ntBASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Gm23119-201ENSMUST00000158610 140 ntBASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Gm8959-201ENSMUST00000213150 571 ntBASIC13.02□□□□□ -0.33
Shroom1Q5SX79 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shroom1Q5SX79 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Gm12380-201ENSMUST00000119012 544 ntBASIC13.01□□□□□ -0.33
Shroom1Q5SX79 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Gm44958-201ENSMUST00000203734 736 ntBASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Gm7848-201ENSMUST00000210739 718 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms