Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm18212-201ENSMUST00000211678 889 ntBASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Gm5455-201ENSMUST00000058710 715 ntBASIC14.67□□□□□ -0.06
Vps54Q5SPW0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps54Q5SPW0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm14028-201ENSMUST00000117434 479 ntBASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm5616-201ENSMUST00000165252 384 ntBASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm8741-201ENSMUST00000174736 384 ntBASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm43962-201ENSMUST00000203898 190 ntBASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps54Q5SPW0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Gm14277-201ENSMUST00000121195 360 ntBASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps54Q5SPW0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm12380-201ENSMUST00000119012 544 ntBASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.64□□□□□ -0.07
Vps54Q5SPW0 Gm16505-201ENSMUST00000179981 232 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms