Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps13aQ5H8C4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps13aQ5H8C4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps13aQ5H8C4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.79□□□□□ -0.52
Vps13aQ5H8C4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vps13aQ5H8C4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Gm23439-201ENSMUST00000104292 132 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Gm15615-201ENSMUST00000118876 198 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 AA623943-201ENSMUST00000121794 354 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Mir432-201ENSMUST00000157230 75 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Gm8181-201ENSMUST00000062242 669 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.78□□□□□ -0.52
Vps13aQ5H8C4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps13aQ5H8C4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm13624-201ENSMUST00000120263 462 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm9081-201ENSMUST00000182346 991 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm14395-201ENSMUST00000120494 563 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps13aQ5H8C4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm13827-201ENSMUST00000148801 372 ntBASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm6450-201ENSMUST00000200896 574 ntBASIC11.76□□□□□ -0.53
Vps13aQ5H8C4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms