Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm26286-201ENSMUST00000104166 134 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm15515-201ENSMUST00000117827 822 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm14247-201ENSMUST00000120950 237 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm12164-201ENSMUST00000121695 551 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm37986-201ENSMUST00000193285 383 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm3786-201ENSMUST00000202659 378 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gm11331-201ENSMUST00000119764 288 ntBASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gm26448-201ENSMUST00000082446 203 ntBASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf38aQ4FK66 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Prpf38aQ4FK66 Gm23596-201ENSMUST00000104304 132 ntBASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Gm8343-201ENSMUST00000182705 994 ntBASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Gm43184-201ENSMUST00000197247 542 ntBASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Gm42997-202ENSMUST00000200321 985 ntBASIC14.27□□□□□ -0.13
Prpf38aQ4FK66 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms