Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Spg11Q3UHA3 Gm13192-201ENSMUST00000101199 208 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm10443-201ENSMUST00000119024 210 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm20568-201ENSMUST00000197129 208 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm26670-202ENSMUST00000226862 340 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm10580-201ENSMUST00000097985 396 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm10581-201ENSMUST00000097986 231 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm10582-201ENSMUST00000097987 396 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm10583-201ENSMUST00000097988 396 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm12418-201ENSMUST00000118116 942 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm13039-201ENSMUST00000118638 794 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm11244-201ENSMUST00000121243 237 ntBASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Spg11Q3UHA3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Spg11Q3UHA3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm23062-201ENSMUST00000102349 110 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm9673-201ENSMUST00000119287 781 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm15815-201ENSMUST00000120569 255 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm4310-201ENSMUST00000177847 889 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm30055-201ENSMUST00000203175 803 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm43547-201ENSMUST00000197729 328 ntBASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.2□□□□□ -0.62
Spg11Q3UHA3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms