Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm15371-201ENSMUST00000117057 784 ntBASIC8.34□□□□□ -1.07
Cops9Q3U898 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm4034-201ENSMUST00000187674 480 ntBASIC8.34□□□□□ -1.07
Cops9Q3U898 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.34□□□□□ -1.07
Cops9Q3U898 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm5035-201ENSMUST00000215581 927 ntBASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cops9Q3U898 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cops9Q3U898 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Cops9Q3U898 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Cops9Q3U898 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.34□□□□□ -1.08
Cops9Q3U898 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Cops9Q3U898 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Cops9Q3U898 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC8.33□□□□□ -1.08
Cops9Q3U898 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 Gm29608-201ENSMUST00000190444 463 ntBASIC8.33□□□□□ -1.08
Cops9Q3U898 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.33□□□□□ -1.08
Cops9Q3U898 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 AC126257.2-201ENSMUST00000215507 2300 ntBASIC8.33□□□□□ -1.08
Cops9Q3U898 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cops9Q3U898 AC155252.2-201ENSMUST00000226946 680 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms