Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.76□□□□□ -0.53
Xrra1Q3U3V8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm15370-201ENSMUST00000117158 253 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm15198-201ENSMUST00000117283 177 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm11222-201ENSMUST00000119005 738 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm43179-201ENSMUST00000198797 275 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm8227-201ENSMUST00000223306 571 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Xrra1Q3U3V8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm13736-201ENSMUST00000119272 253 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm44364-201ENSMUST00000198368 141 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.74□□□□□ -0.53
Xrra1Q3U3V8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms