Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gm11425-201ENSMUST00000119608 498 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Mir7085-201ENSMUST00000184353 66 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gm29127-201ENSMUST00000188304 517 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gm43438-201ENSMUST00000198133 379 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Gm9396-201ENSMUST00000076703 567 ntBASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43aQ3TL54 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm13226-201ENSMUST00000117838 404 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43aQ3TL54 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43aQ3TL54 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms