Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.04□□□□□ -0.48
Sox4Q06831 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox4Q06831 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Sox4Q06831 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Gm19187-201ENSMUST00000206781 892 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Gm18056-201ENSMUST00000207670 568 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Gm18061-201ENSMUST00000208350 562 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Gm18063-201ENSMUST00000208529 568 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Gm18052-201ENSMUST00000208750 559 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Gm45598-202ENSMUST00000210719 986 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.04□□□□□ -0.48
Sox4Q06831 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sox4Q06831 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Sox4Q06831 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox4Q06831 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox4Q06831 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm11989-201ENSMUST00000117240 672 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 Gm13296-201ENSMUST00000117854 997 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm11362-201ENSMUST00000118838 850 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm4034-201ENSMUST00000187674 480 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm32999-201ENSMUST00000192693 562 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.03□□□□□ -0.48
Sox4Q06831 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sox4Q06831 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox4Q06831 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox4Q06831 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms