Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.1□□□□□ -0.31
VcpQ01853 Gm9630-201ENSMUST00000178304 885 ntBASIC13.1□□□□□ -0.31
VcpQ01853 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.1□□□□□ -0.31
VcpQ01853 Gm8885-201ENSMUST00000189382 598 ntBASIC13.1□□□□□ -0.31
VcpQ01853 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.1□□□□□ -0.31
VcpQ01853 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Gm5904-201ENSMUST00000210286 865 ntBASIC13.1□□□□□ -0.31
VcpQ01853 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.1□□□□□ -0.31
VcpQ01853 Gm22058-201ENSMUST00000083393 310 ntBASIC13.1□□□□□ -0.31
VcpQ01853 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VcpQ01853 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VcpQ01853 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VcpQ01853 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VcpQ01853 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VcpQ01853 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
VcpQ01853 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VcpQ01853 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VcpQ01853 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
VcpQ01853 Gm14109-201ENSMUST00000118814 309 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gm15547-201ENSMUST00000122152 333 ntBASIC13.09□□□□□ -0.31
VcpQ01853 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.09□□□□□ -0.31
VcpQ01853 Gm19459-201ENSMUST00000176240 835 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.09□□□□□ -0.31
VcpQ01853 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.09□□□□□ -0.31
VcpQ01853 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.09□□□□□ -0.31
VcpQ01853 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.09□□□□□ -0.31
VcpQ01853 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VcpQ01853 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
VcpQ01853 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VcpQ01853 Paupar-201ENSMUST00000194826 3482 ntBASIC13.08□□□□□ -0.31
VcpQ01853 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
VcpQ01853 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VcpQ01853 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.08□□□□□ -0.32
VcpQ01853 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VcpQ01853 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.08□□□□□ -0.32
VcpQ01853 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
VcpQ01853 Gm11667-201ENSMUST00000119828 486 ntBASIC13.08□□□□□ -0.32
VcpQ01853 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.08□□□□□ -0.32
VcpQ01853 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.08□□□□□ -0.32
VcpQ01853 Gm27552-201ENSMUST00000183351 62 ntBASIC13.08□□□□□ -0.32
VcpQ01853 Gm27844-201ENSMUST00000183613 62 ntBASIC13.08□□□□□ -0.32
VcpQ01853 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.08□□□□□ -0.32
VcpQ01853 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.08□□□□□ -0.32
VcpQ01853 Gm38092-201ENSMUST00000195600 653 ntBASIC13.08□□□□□ -0.32
VcpQ01853 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.08□□□□□ -0.32
VcpQ01853 Spcs1-203ENSMUST00000226374 592 ntBASIC13.08□□□□□ -0.32
VcpQ01853 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms