Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col1a2Q01149 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col1a2Q01149 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col1a2Q01149 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.21■□□□□ 0.03
Col1a2Q01149 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col1a2Q01149 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col1a2Q01149 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col1a2Q01149 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.21■□□□□ 0.03
Col1a2Q01149 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col1a2Q01149 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col1a2Q01149 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.21■□□□□ 0.02
Col1a2Q01149 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm22144-201ENSMUST00000157402 102 ntBASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.21■□□□□ 0.02
Col1a2Q01149 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.21■□□□□ 0.02
Col1a2Q01149 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.21■□□□□ 0.02
Col1a2Q01149 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.21■□□□□ 0.02
Col1a2Q01149 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col1a2Q01149 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.21■□□□□ 0.02
Col1a2Q01149 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.2■□□□□ 0.02
Col1a2Q01149 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Gm9192-201ENSMUST00000183221 985 ntBASIC15.2■□□□□ 0.02
Col1a2Q01149 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Col1a2Q01149 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.2■□□□□ 0.02
Col1a2Q01149 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.2■□□□□ 0.02
Col1a2Q01149 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.2■□□□□ 0.02
Col1a2Q01149 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.2■□□□□ 0.02
Col1a2Q01149 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col1a2Q01149 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col1a2Q01149 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col1a2Q01149 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col1a2Q01149 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col1a2Q01149 Gm15573-201ENSMUST00000119487 540 ntBASIC15.19■□□□□ 0.02
Col1a2Q01149 Gm15881-201ENSMUST00000148792 942 ntBASIC15.19■□□□□ 0.02
Col1a2Q01149 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Col1a2Q01149 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.19■□□□□ 0.02
Col1a2Q01149 Gm3508-201ENSMUST00000186012 792 ntBASIC15.19■□□□□ 0.02
Col1a2Q01149 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms