Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.01□□□□□ -0.65
Shc1P98083 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shc1P98083 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm14109-201ENSMUST00000118814 309 ntBASIC11.01□□□□□ -0.65
Shc1P98083 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.01□□□□□ -0.65
Shc1P98083 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shc1P98083 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.01□□□□□ -0.65
Shc1P98083 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm10312-201ENSMUST00000078515 489 ntBASIC11.01□□□□□ -0.65
Shc1P98083 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Shc1P98083 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Shc1P98083 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shc1P98083 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.01□□□□□ -0.65
Shc1P98083 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shc1P98083 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11□□□□□ -0.65
Shc1P98083 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11□□□□□ -0.65
Shc1P98083 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11□□□□□ -0.65
Shc1P98083 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Gm26083-201ENSMUST00000157904 193 ntBASIC11□□□□□ -0.65
Shc1P98083 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11□□□□□ -0.65
Shc1P98083 AA914427-201ENSMUST00000193194 1166 ntBASIC11□□□□□ -0.65
Shc1P98083 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11□□□□□ -0.65
Shc1P98083 AC098716.1-201ENSMUST00000213527 703 ntBASIC11□□□□□ -0.65
Shc1P98083 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Shc1P98083 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11□□□□□ -0.65
Shc1P98083 Gzmn-202ENSMUST00000225535 989 ntBASIC11□□□□□ -0.65
Shc1P98083 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11□□□□□ -0.65
Shc1P98083 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11□□□□□ -0.65
Shc1P98083 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11□□□□□ -0.65
Shc1P98083 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shc1P98083 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shc1P98083 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Shc1P98083 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shc1P98083 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shc1P98083 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shc1P98083 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms