Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thumpd3P97770 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Thumpd3P97770 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Thumpd3P97770 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Thumpd3P97770 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Thumpd3P97770 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Thumpd3P97770 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Thumpd3P97770 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm14760-201ENSMUST00000121831 999 ntBASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm17208-201ENSMUST00000168388 535 ntBASIC12.46□□□□□ -0.41
Thumpd3P97770 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm27501-201ENSMUST00000183599 107 ntBASIC12.46□□□□□ -0.41
Thumpd3P97770 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm43822-201ENSMUST00000200285 476 ntBASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.46□□□□□ -0.41
Thumpd3P97770 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Thumpd3P97770 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Thumpd3P97770 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Thumpd3P97770 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Thumpd3P97770 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Thumpd3P97770 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.46□□□□□ -0.42
Thumpd3P97770 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Thumpd3P97770 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.45□□□□□ -0.42
Thumpd3P97770 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.45□□□□□ -0.42
Thumpd3P97770 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Thumpd3P97770 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Gm43133-201ENSMUST00000197472 463 ntBASIC12.45□□□□□ -0.42
Thumpd3P97770 Gm8099-201ENSMUST00000200510 742 ntBASIC12.45□□□□□ -0.42
Thumpd3P97770 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.45□□□□□ -0.42
Thumpd3P97770 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Thumpd3P97770 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.45□□□□□ -0.42
Thumpd3P97770 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd3P97770 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.45□□□□□ -0.42
Thumpd3P97770 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms