Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.61□□□□□ -0.55
Nkx3-2P97503 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm26361-201ENSMUST00000158868 186 ntBASIC11.61□□□□□ -0.55
Nkx3-2P97503 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.61□□□□□ -0.55
Nkx3-2P97503 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.61□□□□□ -0.55
Nkx3-2P97503 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-2P97503 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm11597-201ENSMUST00000121423 964 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm11434-201ENSMUST00000122379 629 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rmrp-201ENSMUST00000157463 271 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm39404-201ENSMUST00000216350 313 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.6□□□□□ -0.55
Nkx3-2P97503 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-2P97503 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms