Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.31■□□□□ 0.04
Smarcc1P97496 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcc1P97496 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.3■□□□□ 0.04
Smarcc1P97496 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.3■□□□□ 0.04
Smarcc1P97496 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Smarcc1P97496 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Smarcc1P97496 AC166341.2-201ENSMUST00000220571 120 ntBASIC15.3■□□□□ 0.04
Smarcc1P97496 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcc1P97496 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcc1P97496 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.29■□□□□ 0.04
Smarcc1P97496 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm12628-201ENSMUST00000122193 382 ntBASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcc1P97496 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.29■□□□□ 0.04
Smarcc1P97496 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcc1P97496 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcc1P97496 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.28■□□□□ 0.04
Smarcc1P97496 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.28■□□□□ 0.04
Smarcc1P97496 Gm8815-201ENSMUST00000173809 620 ntBASIC15.28■□□□□ 0.04
Smarcc1P97496 Gm28388-201ENSMUST00000186262 437 ntBASIC15.28■□□□□ 0.04
Smarcc1P97496 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.28■□□□□ 0.04
Smarcc1P97496 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.28■□□□□ 0.04
Smarcc1P97496 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcc1P97496 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcc1P97496 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcc1P97496 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.28■□□□□ 0.04
Smarcc1P97496 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smarcc1P97496 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms