Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm11540-201ENSMUST00000117457 780 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC8.04□□□□□ -1.12
PrkdcP97313 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Mir7088-201ENSMUST00000184227 86 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC8.04□□□□□ -1.12
PrkdcP97313 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm15197-201ENSMUST00000120526 478 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm28323-201ENSMUST00000186817 2499 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Gm43811-201ENSMUST00000202862 695 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Gm5178-201ENSMUST00000219380 898 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 AC102523.1-201ENSMUST00000228706 1144 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm5308-201ENSMUST00000196752 1354 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Prss23os-202ENSMUST00000179361 1362 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm23912-201ENSMUST00000104687 87 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Mir1190-201ENSMUST00000116925 96 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm43244-201ENSMUST00000196994 1285 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 AC134601.2-201ENSMUST00000221071 130 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
PrkdcP97313 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.04□□□□□ -1.12
PrkdcP97313 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PrkdcP97313 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm27196-201ENSMUST00000184787 2582 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Gm25148-201ENSMUST00000104611 123 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm45090-201ENSMUST00000208775 1148 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Gm18391-201ENSMUST00000217189 658 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm14633-201ENSMUST00000121152 470 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm4903-201ENSMUST00000210462 405 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PrkdcP97313 Gm5996-201ENSMUST00000211110 718 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Gm8618-201ENSMUST00000097570 432 ntBASIC8.03□□□□□ -1.12
PrkdcP97313 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms