Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim43bP86448 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim43bP86448 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim43bP86448 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.61□□□□□ -0.39
Trim43bP86448 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.61□□□□□ -0.39
Trim43bP86448 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim43bP86448 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim43bP86448 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim43bP86448 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Mir1247-201ENSMUST00000116706 82 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 Gm15198-201ENSMUST00000117283 177 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43bP86448 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43bP86448 Gm25261-201ENSMUST00000157416 134 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Gm37042-201ENSMUST00000193816 581 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 Gm3961-201ENSMUST00000204425 994 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim43bP86448 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.6□□□□□ -0.39
Trim43bP86448 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43bP86448 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43bP86448 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43bP86448 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Gm14921-201ENSMUST00000118643 908 ntBASIC12.59□□□□□ -0.39
Trim43bP86448 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43bP86448 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Trim43bP86448 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43bP86448 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Gm38266-201ENSMUST00000194931 421 ntBASIC12.59□□□□□ -0.39
Trim43bP86448 Gm43133-201ENSMUST00000197472 463 ntBASIC12.59□□□□□ -0.39
Trim43bP86448 Gm43179-201ENSMUST00000198797 275 ntBASIC12.59□□□□□ -0.39
Trim43bP86448 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim43bP86448 Gm18584-201ENSMUST00000203098 964 ntBASIC12.59□□□□□ -0.39
Trim43bP86448 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.59□□□□□ -0.39
Trim43bP86448 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim43bP86448 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43bP86448 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms