Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H3f3aP84244 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm14109-201ENSMUST00000118814 309 ntBASIC10.91□□□□□ -0.66
H3f3aP84244 Gm13350-201ENSMUST00000120519 479 ntBASIC10.91□□□□□ -0.66
H3f3aP84244 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm7584-201ENSMUST00000175829 940 ntBASIC10.91□□□□□ -0.66
H3f3aP84244 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.91□□□□□ -0.66
H3f3aP84244 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.91□□□□□ -0.66
H3f3aP84244 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
H3f3aP84244 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.91□□□□□ -0.66
H3f3aP84244 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3aP84244 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3aP84244 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.9□□□□□ -0.66
H3f3aP84244 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.9□□□□□ -0.66
H3f3aP84244 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm4034-201ENSMUST00000187674 480 ntBASIC10.9□□□□□ -0.66
H3f3aP84244 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.9□□□□□ -0.66
H3f3aP84244 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm13097-201ENSMUST00000210722 397 ntBASIC10.9□□□□□ -0.66
H3f3aP84244 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3aP84244 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.9□□□□□ -0.66
H3f3aP84244 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.9□□□□□ -0.67
H3f3aP84244 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.9□□□□□ -0.67
H3f3aP84244 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
H3f3aP84244 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.9□□□□□ -0.67
H3f3aP84244 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3f3aP84244 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3f3aP84244 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.89□□□□□ -0.67
H3f3aP84244 Gm23912-201ENSMUST00000104687 87 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Gm6963-201ENSMUST00000147879 379 ntBASIC10.89□□□□□ -0.67
H3f3aP84244 Gm27046-201ENSMUST00000182160 463 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms