Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
SgcbP82349 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
SgcbP82349 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
SgcbP82349 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
SgcbP82349 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcbP82349 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcbP82349 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.95□□□□□ -0.66
SgcbP82349 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
SgcbP82349 Gm24934-201ENSMUST00000103764 111 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Gm22323-201ENSMUST00000103832 109 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.95□□□□□ -0.66
SgcbP82349 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.95□□□□□ -0.66
SgcbP82349 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Gm28923-201ENSMUST00000187755 322 ntBASIC10.95□□□□□ -0.66
SgcbP82349 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.95□□□□□ -0.66
SgcbP82349 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm44651-201ENSMUST00000207343 372 ntBASIC10.95□□□□□ -0.66
SgcbP82349 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.95□□□□□ -0.66
SgcbP82349 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SgcbP82349 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
SgcbP82349 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SgcbP82349 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SgcbP82349 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcbP82349 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcbP82349 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcbP82349 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SgcbP82349 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.94□□□□□ -0.66
SgcbP82349 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.94□□□□□ -0.66
SgcbP82349 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.94□□□□□ -0.66
SgcbP82349 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.94□□□□□ -0.66
SgcbP82349 Gm24845-201ENSMUST00000158034 109 ntBASIC10.94□□□□□ -0.66
SgcbP82349 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.94□□□□□ -0.66
SgcbP82349 Gm42937-201ENSMUST00000197360 752 ntBASIC10.94□□□□□ -0.66
SgcbP82349 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.94□□□□□ -0.66
SgcbP82349 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.94□□□□□ -0.66
SgcbP82349 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.94□□□□□ -0.66
SgcbP82349 Gm13097-201ENSMUST00000210722 397 ntBASIC10.94□□□□□ -0.66
SgcbP82349 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.94□□□□□ -0.66
SgcbP82349 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.94□□□□□ -0.66
SgcbP82349 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SgcbP82349 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms