Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CiitaP79621 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CiitaP79621 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CiitaP79621 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.25□□□□□ -0.29
CiitaP79621 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CiitaP79621 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CiitaP79621 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CiitaP79621 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.25□□□□□ -0.29
CiitaP79621 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.25□□□□□ -0.29
CiitaP79621 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.25□□□□□ -0.29
CiitaP79621 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CiitaP79621 Gm17827-201ENSMUST00000211825 742 ntBASIC13.25□□□□□ -0.29
CiitaP79621 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.25□□□□□ -0.29
CiitaP79621 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CiitaP79621 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CiitaP79621 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.25□□□□□ -0.29
CiitaP79621 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.24□□□□□ -0.29
CiitaP79621 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.24□□□□□ -0.29
CiitaP79621 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.24□□□□□ -0.29
CiitaP79621 Gm18734-201ENSMUST00000172937 808 ntBASIC13.24□□□□□ -0.29
CiitaP79621 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.24□□□□□ -0.29
CiitaP79621 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CiitaP79621 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.24□□□□□ -0.29
CiitaP79621 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CiitaP79621 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.23□□□□□ -0.29
CiitaP79621 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CiitaP79621 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CiitaP79621 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CiitaP79621 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CiitaP79621 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.23□□□□□ -0.29
CiitaP79621 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms