Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.06□□□□□ -0.48
Shox2P70390 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Shox2P70390 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Shox2P70390 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shox2P70390 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Shox2P70390 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.05□□□□□ -0.48
Shox2P70390 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.05□□□□□ -0.48
Shox2P70390 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Gm6152-201ENSMUST00000151704 340 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Gm5354-201ENSMUST00000182417 973 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Gm2213-201ENSMUST00000197485 688 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Gm43002-201ENSMUST00000200310 155 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.05□□□□□ -0.48
Shox2P70390 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.05□□□□□ -0.48
Shox2P70390 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.05□□□□□ -0.48
Shox2P70390 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shox2P70390 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.05□□□□□ -0.48
Shox2P70390 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.04□□□□□ -0.48
Shox2P70390 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Shox2P70390 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Shox2P70390 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Shox2P70390 Gm13223-201ENSMUST00000118609 747 ntBASIC12.04□□□□□ -0.48
Shox2P70390 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.04□□□□□ -0.48
Shox2P70390 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Shox2P70390 Gm27430-201ENSMUST00000184585 107 ntBASIC12.04□□□□□ -0.48
Shox2P70390 Gm37042-201ENSMUST00000193816 581 ntBASIC12.04□□□□□ -0.48
Shox2P70390 Gm44333-201ENSMUST00000197168 107 ntBASIC12.04□□□□□ -0.48
Shox2P70390 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.04□□□□□ -0.48
Shox2P70390 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.04□□□□□ -0.48
Shox2P70390 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shox2P70390 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms