Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.42■□□□□ 0.22
Nphp4P59240 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Nphp4P59240 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nphp4P59240 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nphp4P59240 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nphp4P59240 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Gm13347-201ENSMUST00000120298 1353 ntBASIC16.41■□□□□ 0.22
Nphp4P59240 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nphp4P59240 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC16.41■□□□□ 0.22
Nphp4P59240 Gm12419-201ENSMUST00000116649 636 ntBASIC16.41■□□□□ 0.22
Nphp4P59240 Gm14585-201ENSMUST00000120713 634 ntBASIC16.41■□□□□ 0.22
Nphp4P59240 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Gm44506-201ENSMUST00000206278 965 ntBASIC16.41■□□□□ 0.22
Nphp4P59240 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC16.41■□□□□ 0.22
Nphp4P59240 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nphp4P59240 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nphp4P59240 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nphp4P59240 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Nphp4P59240 Gm8737-201ENSMUST00000122208 642 ntBASIC16.4■□□□□ 0.22
Nphp4P59240 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.4■□□□□ 0.22
Nphp4P59240 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Gm10807-201ENSMUST00000177134 795 ntBASIC16.4■□□□□ 0.22
Nphp4P59240 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Gm5542-201ENSMUST00000195485 1089 ntBASIC16.4■□□□□ 0.22
Nphp4P59240 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.4■□□□□ 0.22
Nphp4P59240 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nphp4P59240 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Nphp4P59240 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Nphp4P59240 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nphp4P59240 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nphp4P59240 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nphp4P59240 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.4■□□□□ 0.22
Nphp4P59240 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm15725-201ENSMUST00000119947 1090 ntBASIC16.39■□□□□ 0.21
Nphp4P59240 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm4654-201ENSMUST00000183305 982 ntBASIC16.39■□□□□ 0.21
Nphp4P59240 Mir7076-201ENSMUST00000183519 74 ntBASIC16.39■□□□□ 0.21
Nphp4P59240 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.39■□□□□ 0.21
Nphp4P59240 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC16.39■□□□□ 0.21
Nphp4P59240 Gm6108-201ENSMUST00000208365 367 ntBASIC16.39■□□□□ 0.21
Nphp4P59240 AC134869.4-202ENSMUST00000224350 837 ntBASIC16.39■□□□□ 0.21
Nphp4P59240 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.39■□□□□ 0.21
Nphp4P59240 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nphp4P59240 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms