Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Tpm1P58771 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.64□□□□□ -0.23
Tpm1P58771 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tpm1P58771 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.63□□□□□ -0.23
Tpm1P58771 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Tpm1P58771 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.63□□□□□ -0.23
Tpm1P58771 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tpm1P58771 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tpm1P58771 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tpm1P58771 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.63□□□□□ -0.23
Tpm1P58771 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm12859-201ENSMUST00000117834 427 ntBASIC13.63□□□□□ -0.23
Tpm1P58771 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm16296-201ENSMUST00000159905 325 ntBASIC13.63□□□□□ -0.23
Tpm1P58771 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Tpm1P58771 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.63□□□□□ -0.23
Tpm1P58771 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.63□□□□□ -0.23
Tpm1P58771 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.63□□□□□ -0.23
Tpm1P58771 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Tpm1P58771 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.63□□□□□ -0.23
Tpm1P58771 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tpm1P58771 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Rgr-203ENSMUST00000225070 4704 ntBASIC13.62□□□□□ -0.23
Tpm1P58771 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.62□□□□□ -0.23
Tpm1P58771 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.62□□□□□ -0.23
Tpm1P58771 Gm8463-201ENSMUST00000208573 613 ntBASIC13.62□□□□□ -0.23
Tpm1P58771 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.62□□□□□ -0.23
Tpm1P58771 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Tpm1P58771 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Tpm1P58771 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.62□□□□□ -0.23
Tpm1P58771 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Tpm1P58771 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Tpm1P58771 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tpm1P58771 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.62□□□□□ -0.23
Tpm1P58771 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
Tpm1P58771 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.61□□□□□ -0.23
Tpm1P58771 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.61□□□□□ -0.23
Tpm1P58771 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms