Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm32025-201ENSMUST00000217960 307 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.87□□□□□ -0.83
Sssca1P56873 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Sssca1P56873 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm13492-201ENSMUST00000119772 665 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Sssca1P56873 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm12363-201ENSMUST00000122250 668 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm5866-201ENSMUST00000177881 973 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Gm27243-201ENSMUST00000183964 521 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Gm6007-201ENSMUST00000208170 823 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.87□□□□□ -0.83
Sssca1P56873 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sssca1P56873 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sssca1P56873 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sssca1P56873 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Sssca1P56873 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sssca1P56873 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.87□□□□□ -0.83
Sssca1P56873 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.86□□□□□ -0.83
Sssca1P56873 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.86□□□□□ -0.83
Sssca1P56873 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sssca1P56873 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sssca1P56873 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms