Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SmoP56726 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SmoP56726 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.3□□□□□ -0.44
SmoP56726 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
SmoP56726 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SmoP56726 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.29□□□□□ -0.44
SmoP56726 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.29□□□□□ -0.44
SmoP56726 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SmoP56726 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SmoP56726 Gm22133-201ENSMUST00000102082 109 ntBASIC12.29□□□□□ -0.44
SmoP56726 Gm4909-201ENSMUST00000118749 794 ntBASIC12.29□□□□□ -0.44
SmoP56726 Gm12217-201ENSMUST00000118858 696 ntBASIC12.29□□□□□ -0.44
SmoP56726 Gm15711-201ENSMUST00000118889 535 ntBASIC12.29□□□□□ -0.44
SmoP56726 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SmoP56726 Gm16570-201ENSMUST00000161951 436 ntBASIC12.29□□□□□ -0.44
SmoP56726 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Gm4607-201ENSMUST00000206649 577 ntBASIC12.29□□□□□ -0.44
SmoP56726 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.29□□□□□ -0.44
SmoP56726 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.29□□□□□ -0.44
SmoP56726 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SmoP56726 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SmoP56726 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SmoP56726 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SmoP56726 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SmoP56726 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
SmoP56726 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SmoP56726 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.28□□□□□ -0.44
SmoP56726 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.28□□□□□ -0.44
SmoP56726 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
SmoP56726 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.28□□□□□ -0.44
SmoP56726 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.28□□□□□ -0.44
SmoP56726 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.28□□□□□ -0.44
SmoP56726 Mir7070-201ENSMUST00000183657 86 ntBASIC12.28□□□□□ -0.44
SmoP56726 Gm28450-201ENSMUST00000187349 638 ntBASIC12.28□□□□□ -0.44
SmoP56726 Rps4l-202ENSMUST00000204242 789 ntBASIC12.28□□□□□ -0.44
SmoP56726 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SmoP56726 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SmoP56726 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SmoP56726 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms