Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm5781-201ENSMUST00000219792 443 ntBASIC11.7□□□□□ -0.54
Cdkn2bP55271 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.7□□□□□ -0.54
Cdkn2bP55271 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.7□□□□□ -0.54
Cdkn2bP55271 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdkn2bP55271 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm6222-202ENSMUST00000182143 629 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm3890-201ENSMUST00000182416 207 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm42937-201ENSMUST00000197360 752 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.69□□□□□ -0.54
Cdkn2bP55271 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdkn2bP55271 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.68□□□□□ -0.54
Cdkn2bP55271 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gm7809-201ENSMUST00000153199 742 ntBASIC11.68□□□□□ -0.54
Cdkn2bP55271 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cdkn2bP55271 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Gm9794-201ENSMUST00000202370 423 ntBASIC11.68□□□□□ -0.54
Cdkn2bP55271 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdkn2bP55271 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms